Format Conversion
-Combine FASTA
-EMBL to FASTA
-EMBL Feature Extractor
-EMBL Trans Extractor
-Filter DNA
-Filter Protein
-GenBank to FASTA
-GenBank Feature Extractor
-GenBank Trans Extractor
-One to Three
-Range Extractor DNA
-Range Extractor Protein
-Reverse Complement
-Split Codons
-Split FASTA
-Three to One
-Window Extractor DNA
-Window Extractor Protein
Sequence Analysis
-Codon Plot
-Codon Usage
-CpG Islands
-DNA Molecular Weight
-DNA Pattern Find
-DNA Stats
-Fuzzy Search DNA
-Fuzzy Search Protein
-Ident and Sim
-Multi Rev Trans
-Mutate for Digest
-ORF Finder
-Pairwise Align Codons
-Pairwise Align DNA
-Pairwise Align Protein
-PCR Primer Stats
-PCR Products
-Protein GRAVY
-Protein Isoelectric Point
-Protein Molecular Weight
-Protein Pattern Find
-Protein Stats
-Restriction Digest
-Restriction Summary
-Reverse Translate
-Translate
Sequence Figures
-Color Align Conservation
-Color Align Properties
-Group DNA
-Group Protein
-Primer Map
-Restriction Map
-Translation Map
Random Sequences
-Mutate DNA
-Mutate Protein
-Random Coding DNA
-Random DNA Sequence
-Random DNA Regions
-Random Protein Sequence
-Random Protein Regions
-Sample DNA
-Sample Protein
-Shuffle DNA
-Shuffle Protein
Miscellaneous
-IUPAC codes
-Genetic codes
-Browser compatibility
-Mirror this site
-Use this site off-line
-About this site
-Acknowledgments
-Reference
The Sequence Manipulation Suite Copyright © 2000, 2004 Paul Stothard. Send questions and comments to stothard@ualberta.ca
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Sequence Manipulation Suite:
Filter DNA
Filter DNA removes non-DNA characters from text. Use this program when you wish to remove digits and blank spaces from a sequence to make it suitable for other applications.
Paste the text into the text area below. Input limit is 500000 characters.
1 ttaagatttg cgctttgcca actgtacacc caacctcggt 41 ttattgtcga acctcccgct tgtgccgcca tctgcatata 81 gatcccggtc agtccgtcac attctgccaa ttgagtatcc 121 tcgaagtctt attccacgtg ctcaaagcaa gggtatcgta 161 cagtgataac cgcctcgtgc agatccaaat tctcgattaa 201 cactcaagta ctgattttta tcatcaggta actaaaaact 241 cacaatttga agcaccagcg agaatcgttc tattctctag 281 cttcgcaaca tcgacagttg taatggcata acttcggcat 321 tcatagtggc tgagtttagc ggactaagcg aaaaactggt 361 cgttagatct tcctcaccat gattttacaa gaaaggtgaa 401 ctcaatttga cggcggtaaa gttagatggc tacgcgcgac 441 aagtctccgt atcgtcatga aattagcgaa gaggtaatgg 481 caaagcttgg ctacgaatac aggagcgcgc tgtgattaca 521 gtagggttag gatagcgaaa acgttcaacg tggatagact 561 cttatcggca cacgatcata tgcttccaag gttcccaagg 601 cgaattacta gggtgcacag agctacgagt acgctgtccg 641 gcttgattcg ctcgtacatc cactgttcaa aaagctccga 681 taccgacgat cactctcgat ctctgtgtgg gacgcactta 721 ttgtggaatc agtcaaccag tgaagcattc acatgtacgt 761 ggtacggcac gccgtggtat gttagcgttc cctgcgccgc 801 aagtaaaccc ttcagctgtc acctcctata gtaacacgct 841 cgcatgcaga gcctagcacc ttagctctga gttgcctgcc 881 ggaaggatat attctgtatg tgattaaagc gaagtcaaag 921 taaacccccc acatgcagac ctgggtaaat tctcactcag 961 ttgaaacgta ggggccaata cgtgtgtcct tgatactact
Please check the
browser compatibility
page before using this program.
remove non 'gatcn' characters
remove non 'gatcryswkmbdhvnx' characters
remove 't'
remove 'u'
remove white space
remove digits
remove only digits and white space
remove everything except lowercase text
remove everything except uppercase text
replace removed characters with nothing
replace removed characters with 'n'
replace removed characters with 'N'
replace removed characters with 't'
replace removed characters with 'T'
replace removed characters with 'u'
replace removed characters with 'U'
replace removed characters with '-'
replace removed characters with '?'
replace removed characters with '*'
convert remaining characters to uppercase
convert remaining characters to lowercase
don't change the case of remaining characters
*This page requires JavaScript. See
browser compatibility.
*You can
mirror this page
or
use it off-line
.
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Tue Jun 15 14:20:12 2010