Note: details on alternative gene predictions
from Uniprot (2 proteins!) will be added later.
Domains:
-
FH2 (FH2)
-
coiled-coil (CC)
-
other low complexity
-
internal repeat marked in bold
>AtFH21 (AtF17)
MSPVEISGADAVVSPPMRGRVPLPPPPPPPPPPMRRRAPLPPPPPPPMRRRAPLPPPPPP
AMRRRVLPRPPPPPPPLPMFDAEVLCCCYPPTRVRREAPLPPPPLIFVGAPPPTCALKGI
VCCFPCPSKKKSSLKRFNWVKITRALPGSLWDELQIQQVCHGDIEDEQILCAIELDVSEI
ETFFSLGAAKPEKDPLIDLRRATDTELTLMLLNIRLPADMMAAIMAMDESVLDDDEIRGL
INLFPTKENMELLMSYTGGKWTLEKWEQSFSSVINFTITVLPRAKEGATSRIKAERKRDY
VSQQRLRNCIFLVLLLIMIAVQITQFKKRLNVVNSACEEVLASEASDLLDVHKDLQSLES
ASKKQLKSLAEEMQDIIRDLEKLNQELTAAETDGPDSQVFRNTLKDFISIAETEVKTVLS
LYSVVGKNAVALVNYFGEDPKWCPFEQVTATLLHFIRLFEKAHEENVKKADLEKKKAANE
TEMKHVVHNSWLNNLNIRASTLIDQRRAFNTMIMLQKVEMPLPDMMAAVLGMDESVLDVD
QIENLIRFCPTKEEMKLLKNYTGDKATLGKCEQYFLELMKVPGVESKLRVFSFKIHFGTQ
IKELNKGLNTVNSACEEIRTSQKLKEIMKIILCLGNILNQGTARGSAVGFKLDSLLNLSE
KCSANTNMTLMHYLCKVLASKASDLLDFHKDLENLESASKIHLKSLAEEMVAITKGLQKL
NQELTASESDGPISEVFRKLLKDFISVAETQVATVSSLYSSVGGNTDALVHYFGEDPNDY
PFEQAAHQENVKQAELEKKKAAKEAEMEKTKKRVSLTNKKASGVGEEESCLI
Internal repeat:
IDLRRATDTELTLMLLNIRLPADMMAAIMAMDESVLDDDEIRGLINLFPTKENMELLMSY
IDQRRAFNTMIMLQKVEMPLP-DMMAAVLGMDESVLDVDQIENLIRFCPTKEEMKLLKNY
TGGKWTLEKWEQSFSSVINFTITVLPRAKEGATSRIKAERKRDYVSQQRLRNCIFLVLLL
TGDKATLGKCEQYFLELMKVPGVESKLRVFSFKIHFGTQIKELNKG--------------
IMIAVQITQFKKRLNVVNSACEE-------------------------------------
-------------LNTVNSACEEIRTSQKLKEIMKIILCLGNILNQGTARGSAVGFKLDS
----------------------VLASEASDLLDVHKDLQSLESASKKQLKSLAEEMQDII
LLNLSEKCSANTNMTLMHYLCKVLASKASDLLDFHKDLENLESASKIHLKSLAEEMVAIT
RDLEKLNQELTAAETDGPDSQVFRNTLKDFISIAETEVKTVLSLYSVVGKNAVALVNYFG
KGLQKLNQELTASESDGPISEVFRKLLKDFISVAETQVATVSSLYSSVGGNTDALVHYFG
EDPKWCPFEQ
EDPNDYPFEQ
i.e. there is a second incomplete FH2; splicing
may be questionable since not completely backed by cDNA data.